BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036E11SP1|AL430251
(911 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1639 1466 0.0
3x_Contig1189 198 1e-50
>3x_Contig1639
Length = 14140
Score = 1466 bits (739), Expect = 0.0
Identities = 756/761 (99%), Gaps = 1/761 (0%)
Strand = Plus / Plus
Query: 152 cctgtaaatataaatcacgagggcactttcctttcagttttttggatagagcttcagtcc 211
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 cctgttaatatatatcacgagggcactttcctttcagttttttggatagagcttcagtcc 64
Query: 212 gtgttgcattggatttttgtcgccgaacgctatcaccaccgctcattcgtttgttccgat 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 gtgttgcattggatttttgtcgccgaacgctatcaccaccgctcattcgtttgttccgat 124
Query: 272 aaagctataactgtctgggctatattggaaccttaaacccgttctctcaagtgccattaa 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 aaagctataactgtctgggctatattggaaccttaaacccgttctctcaagtgccattaa 184
Query: 332 actaaaagcaccgagattattaccctatctttcttataaaaaaagaaatagaacctccgt 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 actaaaagcaccgagattattaccctatctttcttataaaaaaagaaatagaacctccgt 244
Query: 392 agaccgtttctcttagcccaatttgggttttccacctcgttcctttttattttagtttca 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 agaccgtttctcttagcccaatttgggttttccacctcgttcctttttattttagtttca 304
Query: 452 gttttctattttgtcgcccttgcaggtgatggctacatcctctactggaagctccatcga 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gttttctattttgtcgcccttgcaggtgatggctacatcctctactggaagctccatcga 364
Query: 512 gaaatggaaactgcaggaccatattctttcattgctgcggtattaactgggtgaagctga 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gaaatggaaactgcaggaccatattctttcattgctgcggtattaactgggtgaagctga 424
Query: 572 tcatttgaaaaagaaataggaaggtgtatgggttgttccaggaatatttaaggctcttct 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tcatttgaaaaagaaataggaaggtgtatgggttgttccaggaatatttaaggctcttct 484
Query: 632 ctggacagcccttagaatcccgcgccagggattgttcgaaagtggcgtattgaatctttt 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ctggacagcccttagaatcccgcgccagggattgttcgaaagtggcgtattgaatctttt 544
Query: 692 tgtatgcagtttgcggtcttttcttttggttcatggcacaatcttattttctttactttt 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tgtatgcagtttgcggtcttttcttttggttcatggcacaatcttattttctttactttt 604
Query: 752 tttcattcgcagtaacgttaagaagtgtgtcacaagatgacgagatgagacgatgtagcc 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 tttcattcgcagtaacgttaagaagtgtgtcacaagatgacgagatgagacgatgtagcc 664
Query: 812 attgagcgatccaagactggaggtactttagaagctgttagatgcgtm-tttagcctcag 870
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 665 attgagcgatccaagactggaggtactttagaagctgttagatgcgtagcttagcctcag 724
Query: 871 ccaaagagatggcaatcgtattctgattgccttttccctca 911
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 ccaaagagatggcaatcgtattctgattgccttttccctca 765
>3x_Contig1189
Length = 5010
Score = 198 bits (100), Expect = 1e-50
Identities = 110/112 (98%), Gaps = 1/112 (0%)
Strand = Plus / Plus
Query: 1 atctttcactcctgcccattttg-ttttgctgtacttggcaaaaggattaatcgtaaccc 59
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 4899 atctttcactcctgcccattttggttttgctgtacttggcaaaaggattaatcgtaaccc 4958
Query: 60 ggccatggccggttacacttagccggaagccggaagtttccttttgccaagt 111
||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4959 ggccatggcgggttacacttagccggaagccggaagtttccttttgccaagt 5010
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7027
Number of Sequences: 1807
Number of extensions: 7027
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 2
length of query: 911
length of database: 10,358,551
effective HSP length: 16
effective length of query: 895
effective length of database: 10,329,639
effective search space: 9245026905
effective search space used: 9245026905
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)